TECA
The Toolkit for Extreme Climate Analysis
teca_cartesian_mesh_reader Class Reference

A reader for data stored in binary cartesian_mesh format. More...

#include <teca_cartesian_mesh_reader.h>

Inheritance diagram for teca_cartesian_mesh_reader:
Collaboration diagram for teca_cartesian_mesh_reader:

Public Member Functions

std::shared_ptr< teca_cartesian_mesh_readershared_from_this ()
 
std::shared_ptr< teca_cartesian_mesh_reader const > shared_from_this () const
 
 teca_cartesian_mesh_reader (const teca_cartesian_mesh_reader &src)=delete
 
 teca_cartesian_mesh_reader (teca_cartesian_mesh_reader &&src)=delete
 
teca_cartesian_mesh_readeroperator= (const teca_cartesian_mesh_reader &src)=delete
 
teca_cartesian_mesh_readeroperator= (teca_cartesian_mesh_reader &&src)=delete
 
const char * get_class_name () const override
 
void set_file_name (const std::string &v)
 
const std::string & get_file_name () const
 
void set_index_column (const std::string &v)
 
const std::string & get_index_column () const
 
void set_generate_original_ids (const int &v)
 
const int & get_generate_original_ids () const
 
size_t get_number_of_metadata_column_names ()
 
void append_metadata_column_name (const std::string &v)
 
void set_metadata_column_name (size_t i, const std::string &v)
 
void set_metadata_column_names (const std::vector< std::string > &v)
 
void set_metadata_column_names (const std::initializer_list< std::string > &&l)
 
const std::string & get_metadata_column_name (size_t i) const
 
const std::vector< std::string > & get_metadata_column_names () const
 
void clear_metadata_column_names ()
 
size_t get_number_of_metadata_column_keys ()
 
void append_metadata_column_key (const std::string &v)
 
void set_metadata_column_key (size_t i, const std::string &v)
 
void set_metadata_column_keys (const std::vector< std::string > &v)
 
void set_metadata_column_keys (const std::initializer_list< std::string > &&l)
 
const std::string & get_metadata_column_key (size_t i) const
 
const std::vector< std::string > & get_metadata_column_keys () const
 
void clear_metadata_column_keys ()
 
void add_metadata_column (const std::string &column, const std::string &key)
 
void clear_metadata_columns ()
 
- Public Member Functions inherited from teca_algorithm
 teca_algorithm (const teca_algorithm &src)=delete
 
 teca_algorithm (teca_algorithm &&src)=delete
 
teca_algorithmoperator= (const teca_algorithm &src)=delete
 
teca_algorithmoperator= (teca_algorithm &&src)=delete
 
void set_communicator (MPI_Comm comm)
 
MPI_Comm get_communicator ()
 get the active communicator More...
 
virtual teca_algorithm_output_port get_output_port (unsigned int port=0)
 
void set_input_connection (const teca_algorithm_output_port &port)
 set an input to this algorithm More...
 
virtual void set_input_connection (unsigned int id, const teca_algorithm_output_port &port)
 set an input to this algorithm More...
 
virtual void remove_input_connection (unsigned int id)
 remove input connections More...
 
void clear_input_connections ()
 remove all input connections More...
 
const_p_teca_dataset get_output_data (unsigned int port=0)
 
void pop_cache (unsigned int port=0, int top=0)
 
void set_cache_size (unsigned int n)
 set the cache size. the default is 1. (threadsafe) More...
 
virtual int update ()
 execute the pipeline from this instance up. More...
 
virtual int update (unsigned int port)
 execute the pipeline from this instance up. More...
 
virtual teca_metadata update_metadata (unsigned int port=0)
 get meta data considering this instance up. More...
 
void set_executive (p_teca_algorithm_executive exe)
 set the executive More...
 
p_teca_algorithm_executive get_executive ()
 get the executive More...
 
virtual void to_stream (std::ostream &s) const
 
virtual void from_stream (std::istream &s)
 deserialize from the stream. More...
 
void set_verbose (const int &v)
 
const int & get_verbose () const
 

Static Public Member Functions

static p_teca_cartesian_mesh_reader New ()
 

Additional Inherited Members

- Protected Member Functions inherited from teca_algorithm
void set_number_of_input_connections (unsigned int n)
 
void set_number_of_output_ports (unsigned int n)
 
void set_modified (unsigned int port)
 an overload to set_modified by port More...
 
virtual std::vector< teca_metadataget_upstream_request (unsigned int port, const std::vector< teca_metadata > &input_md, const teca_metadata &request)
 
virtual teca_metadata get_cache_key (unsigned int port, const teca_metadata &request) const
 
virtual teca_metadata get_output_metadata (teca_algorithm_output_port &current)
 
virtual const_p_teca_dataset request_data (teca_algorithm_output_port &port, const teca_metadata &request)
 
virtual int validate_cache (teca_algorithm_output_port &current)
 
virtual void clear_modified (teca_algorithm_output_port current)
 
const_p_teca_dataset get_output_data (unsigned int port, const teca_metadata &request)
 
int cache_output_data (unsigned int port, const teca_metadata &request, const_p_teca_dataset &data)
 
void clear_cache (unsigned int port)
 clear the cache on the given output port More...
 
unsigned int get_number_of_input_connections ()
 get the number of input connections More...
 
teca_algorithm_output_portget_input_connection (unsigned int i)
 
void clear_modified (unsigned int port)
 clear the modified flag on the i'th output More...
 
int get_modified (unsigned int port) const
 return the output port's modified flag value More...
 
- Protected Attributes inherited from teca_algorithm
int verbose
 

Detailed Description

A reader for data stored in binary cartesian_mesh format.

A reader for data stored in binary cartesian_mesh format. By default the reader reads and returns the entire cartesian_mesh on rank 0. The reader can partition the data accross an "index column". The index column assigns a unique id to rows that should be returned together. The reader reports the number of unique ids to the pipeline which can then be requested by the pipeline during parallel or sequential execution.

output: generates a cartesian_mesh containing the data read from the file.

Member Function Documentation

◆ append_metadata_column_key()

void teca_cartesian_mesh_reader::append_metadata_column_key ( const std::string &  v)
inline

append to the metadata_column_key algorithm vector property

◆ append_metadata_column_name()

void teca_cartesian_mesh_reader::append_metadata_column_name ( const std::string &  v)
inline

append to the metadata_column_name algorithm vector property

◆ clear_metadata_column_keys()

void teca_cartesian_mesh_reader::clear_metadata_column_keys ( )
inline

clear the metadata_column_key algorithm vector property

◆ clear_metadata_column_names()

void teca_cartesian_mesh_reader::clear_metadata_column_names ( )
inline

clear the metadata_column_name algorithm vector property

◆ get_class_name()

const char* teca_cartesian_mesh_reader::get_class_name ( ) const
inlineoverridevirtual

returns the name of the class

Implements teca_algorithm.

◆ get_file_name()

const std::string& teca_cartesian_mesh_reader::get_file_name ( ) const
inline

Get the value of the file_name algorithm property

◆ get_generate_original_ids()

const int& teca_cartesian_mesh_reader::get_generate_original_ids ( ) const
inline

Get the value of the generate_original_ids algorithm property

◆ get_index_column()

const std::string& teca_cartesian_mesh_reader::get_index_column ( ) const
inline

Get the value of the index_column algorithm property

◆ get_metadata_column_key()

const std::string& teca_cartesian_mesh_reader::get_metadata_column_key ( size_t  i) const
inline

get the i-th element of the metadata_column_key algorithm vector property

◆ get_metadata_column_keys()

const std::vector< std::string >& teca_cartesian_mesh_reader::get_metadata_column_keys ( ) const
inline

get the metadata_column_key algorithm vector property

◆ get_metadata_column_name()

const std::string& teca_cartesian_mesh_reader::get_metadata_column_name ( size_t  i) const
inline

get the i-th element of the metadata_column_name algorithm vector property

◆ get_metadata_column_names()

const std::vector< std::string >& teca_cartesian_mesh_reader::get_metadata_column_names ( ) const
inline

get the metadata_column_name algorithm vector property

◆ get_number_of_metadata_column_keys()

size_t teca_cartesian_mesh_reader::get_number_of_metadata_column_keys ( )
inline

get the size of the metadata_column_key algorithm vector property

◆ get_number_of_metadata_column_names()

size_t teca_cartesian_mesh_reader::get_number_of_metadata_column_names ( )
inline

get the size of the metadata_column_name algorithm vector property

◆ New()

static p_teca_cartesian_mesh_reader teca_cartesian_mesh_reader::New ( )
inlinestatic

Returns an instance of teca_cartesian_mesh_reader

◆ set_file_name()

void teca_cartesian_mesh_reader::set_file_name ( const std::string &  v)
inline

Set the value of the file_name algorithm property

◆ set_generate_original_ids()

void teca_cartesian_mesh_reader::set_generate_original_ids ( const int &  v)
inline

Set the value of the generate_original_ids algorithm property

◆ set_index_column()

void teca_cartesian_mesh_reader::set_index_column ( const std::string &  v)
inline

Set the value of the index_column algorithm property

◆ set_metadata_column_key()

void teca_cartesian_mesh_reader::set_metadata_column_key ( size_t  i,
const std::string &  v 
)
inline

set the i-th element of the metadata_column_key algorithm vector property

◆ set_metadata_column_keys() [1/2]

void teca_cartesian_mesh_reader::set_metadata_column_keys ( const std::initializer_list< std::string > &&  l)
inline

set the metadata_column_key algorithm vector property

◆ set_metadata_column_keys() [2/2]

void teca_cartesian_mesh_reader::set_metadata_column_keys ( const std::vector< std::string > &  v)
inline

set the metadata_column_key algorithm vector property

◆ set_metadata_column_name()

void teca_cartesian_mesh_reader::set_metadata_column_name ( size_t  i,
const std::string &  v 
)
inline

set the i-th element of the metadata_column_name algorithm vector property

◆ set_metadata_column_names() [1/2]

void teca_cartesian_mesh_reader::set_metadata_column_names ( const std::initializer_list< std::string > &&  l)
inline

set the metadata_column_name algorithm vector property

◆ set_metadata_column_names() [2/2]

void teca_cartesian_mesh_reader::set_metadata_column_names ( const std::vector< std::string > &  v)
inline

set the metadata_column_name algorithm vector property

◆ shared_from_this() [1/2]

std::shared_ptr< teca_cartesian_mesh_reader > teca_cartesian_mesh_reader::shared_from_this ( )
inline

Enables the static constructor

◆ shared_from_this() [2/2]

std::shared_ptr< teca_cartesian_mesh_reader const> teca_cartesian_mesh_reader::shared_from_this ( ) const
inline

Enables the static constructor


The documentation for this class was generated from the following file: